Micheva et al. (2015)

Multi-channel array tomography data which is barrel cortex from an adult mouse (C57BL/6J).


kristina15 Viz i Metadata

Example cutout
# pip install numpy tifffile cloud-volume
import numpy as np
import tifffile
from cloudvolume import CloudVolume

vol = CloudVolume(
    "s3://open-neurodata/kristina15/image/5HT1A_6th", mip=0, use_https=True

# load data into numpy array
cutout = vol[512:1024, 6656:7168, 16:32]

# save cutout as TIFF
tifffile.imwrite("data.tiff", data=np.transpose(cutout))

Documentation for cloud-volume located here

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