Bloss et al. (2018)

Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites

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Data

bloss18 Viz

Example cutout
# pip install numpy tifffile cloud-volume
import numpy as np
import tifffile
from cloudvolume import CloudVolume

vol = CloudVolume(
    "s3://open-neurodata/bloss/bloss18/image", mip=0, use_https=True
)

# load data into numpy array
cutout = vol[5632:6144, 3584:4096, 704:720]

# save cutout as TIFF
tifffile.imwrite("data.tiff", data=np.transpose(cutout))

Documentation for cloud-volume located here

Publications

E. B. Bloss, M. S. Cembrowski, B. Karsh, J. Colonell, R. D. Fetter, and N. Spruston. Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites. Nature Neuroscience, 2018.

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Data on this site are licensed under ODC-By v1.0 license.